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: Composition - 2019-Novel Coronavirus PCR - TTL Representation

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix loinc: <https://loinc.org/rdf/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:Composition ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "covid-1"] ; # 
  fhir:meta [
    ( fhir:profile [
fhir:v "http://hl7.org.au/fhir/core/StructureDefinition/au-core-documentcomposition"^^xsd:anyURI ;
fhir:link <http://hl7.org.au/fhir/core/StructureDefinition/au-core-documentcomposition>     ] )
  ] ; # 
  fhir:language [ fhir:v "en-AU"] ; # 
  fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\" xml:lang=\"en-AU\" lang=\"en-AU\"><p><b>Generated Narrative: Composition</b><a name=\"covid-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Composition &quot;covid-1&quot;  (Language &quot;en-AU&quot;) </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-au-core-documentcomposition.html\">AU Core Document Composition</a></p></div><p><b>identifier</b>: id: urn:uuid:ea43b8f5-f911-4968-a35c-de0a87a9a5ca</p><p><b>status</b>: final</p><p><b>type</b>: Pathology Report <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#11502-2; nctis-data-components-1#100.32001)</span></p><p><b>category</b>: Laboratory report <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#11502-2; nctis-data-components-1#100.32001)</span></p><p><b>date</b>: 2021-02-15 20:00:00+1000</p><p><b>author</b>: <span>: PATHOLOGY LAB</span></p><p><b>title</b>: Mr. Li Wang - SARS-CoV-2 (COVID-19) PCR</p><p><b>custodian</b>: <span>: PATHOLOGY LAB</span></p></div>"
  ] ; # 
  fhir:identifier [
fhir:system [ fhir:v "urn:ietf:rfc:3986"^^xsd:anyURI ] ;
fhir:value [ fhir:v "urn:uuid:ea43b8f5-f911-4968-a35c-de0a87a9a5ca" ]
  ] ; # 
  fhir:status [ fhir:v "final"] ; # 
  fhir:type [
    ( fhir:coding [
a loinc:11502-2 ;
fhir:system [ fhir:v "http://loinc.org"^^xsd:anyURI ] ;
fhir:code [ fhir:v "11502-2" ]     ] [
fhir:system [ fhir:v "https://healthterminologies.gov.au/fhir/CodeSystem/nctis-data-components-1"^^xsd:anyURI ] ;
fhir:code [ fhir:v "100.32001" ]     ] ) ;
fhir:text [ fhir:v "Pathology Report" ]
  ] ; # 
  fhir:category ( [
    ( fhir:coding [
a loinc:11502-2 ;
fhir:system [ fhir:v "http://loinc.org"^^xsd:anyURI ] ;
fhir:code [ fhir:v "11502-2" ]     ] [
fhir:system [ fhir:v "https://healthterminologies.gov.au/fhir/CodeSystem/nctis-data-components-1"^^xsd:anyURI ] ;
fhir:code [ fhir:v "100.32001" ]     ] )
  ] ) ; # 
  fhir:subject [
fhir:reference [ fhir:v "Patient/wang-li" ]
  ] ; # 
  fhir:date [ fhir:v "2021-02-15T20:00:00+10:00"^^xsd:dateTime] ; # 
  fhir:author ( [
fhir:display [ fhir:v "PATHOLOGY LAB" ]
  ] ) ; # 
  fhir:title [ fhir:v "Mr. Li Wang - SARS-CoV-2 (COVID-19) PCR"] ; # 
  fhir:custodian [
fhir:display [ fhir:v "PATHOLOGY LAB" ]
  ] ; # 
  fhir:section ( [
fhir:title [ fhir:v "Pathology" ] ;
fhir:code [
      ( fhir:coding [
a loinc:11526-1 ;
fhir:system [ fhir:v "http://loinc.org"^^xsd:anyURI ] ;
fhir:code [ fhir:v "11526-1" ] ;
fhir:display [ fhir:v "Pathology study" ]       ] [
fhir:system [ fhir:v "https://healthterminologies.gov.au/fhir/CodeSystem/nctis-data-components-1"^^xsd:anyURI ] ;
fhir:code [ fhir:v "101.20018" ] ;
fhir:display [ fhir:v "Pathology" ]       ] )     ] ;
fhir:text [
fhir:status [ fhir:v "additional" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\" lang=\"en-AU\">\n                <table border=\"1\">\n                    <caption>Report Details</caption>\n                    <thead>\n                        <tr>\n                            <th>Report Date/Time</th>\n                            <th>Report Name</th>\n                            <th>Report Status</th>\n                            <th>Lab No</th>\n                            <th>Consultant</th>\n                        </tr>\n                    </thead>\n                    <tbody>\n                        <tr>\n                            <td>15-Feb-2021 20:00</td>\n                            <td>SARS-CoV-2 (COVID-19) PCR for Mr. Li Wang</td>\n                            <td>Final</td>\n                            <td>8328qjs</td>\n                            <td>Dr. Mat Bology (Microbiologist) (07) 7010 3553</td>\n                        </tr>\n                    </tbody>\n                </table>\n                <table border=\"1\">\n                    <caption>SARS-Cov-2 (COVID-19) PCR</caption>\n                    <thead>\n                        <tr>\n                            <th>Specimen Type</th>\n                            <th>Primary Specimen Site</th>\n                            <th>Collection Setting</th>\n                            <th>Date Collected</th>\n                            <th>Time Collected</th>\n                            <th>Test Name</th>\n                            <th>Result</th>\n                            <th>Diagnostic Service</th>\n                        </tr>\n                    </thead>\n                    <tbody>\n                        <tr>\n                            <td>Swab</td>\n                            <td>Nasopharyngeal</td>\n                            <td>COVID HSC Assessment Clinic</td>\n                            <td>15-Feb-2021</td>\n                            <td>12:00</td>\n                            <td>SARS-CoV-2 PCR</td>\n                            <td>Not Detected</td>\n                            <td>Microbiology</td>\n                        </tr>\n                    </tbody>\n                </table>\n                <table>\n                    <caption>Comments</caption>\n                    <tbody>\n                        <tr>\n                            <td>PATHOLOGY LAB QLD NATA/RCPA accreditation does not cover the SARS-CoV-2 (COVID-19) PCR test.</td>\n                        </tr>\n                        <tr>\n                            <td>This test is currently under evaluation and has not been fully validated. Failure to detect\n                                            organism-specific nucleic acids does not exclude the presence of disease due to this agent.</td>\n                        </tr>\n                    </tbody>\n                </table>\n            </div>"     ] ;
    ( fhir:entry [
fhir:reference [ fhir:v "Observation/pathresult-covid-1" ]     ] )
  ] ) . #